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Thanks so much for your patience over the past two weeks as we worked through
forum maintenance.
We should be back to normal now!

Unfortunately attachments to posts made during the week of April 28 - May 4 2024
may have been lost. If you were sharing a file with others on the forum during
that time, check back on your post and see if accessing the attachment works. If
not, you should be able to reattach. Sorry for the inconvenience.

Let us know if anything isn't looking right, and as always, thanks for using the
Forum!

    
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 2. tags
    
    
    
    

 * Categories
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Category Topics
ANNOUNCEMENTS

Announcements related to QIIME 2 releases, publications, workshops, etc.
2 / month

USER SUPPORT

Post to this category if you need help understanding output produced while
running QIIME 2. Examples of this include help understanding plots labels,
techniques that are used in QIIME 2, etc. Posts in this category will be triaged
by a QIIME 2 Moderator and responded to promptly.
36 / month

TECHNICAL SUPPORT

Post to this Category if you are experiencing a technical difficulty while
running QIIME 2. Examples of difficulties include installation errors, help
deciphering error messages, etc. Posts in this category will be triaged by a
QIIME 2 Moderator and responded to promptly.
25 / month

COMMUNITY PLUGIN SUPPORT

Post to this category if you have a question about a community plugin (bug
report, technical detail, etc.). Community plugins are plugins not distributed
in the QIIME 2 Core Distribution. Please note, in the future we are planning on
moving away from the notion of a “Core Distribution,” where all pl…
6 / month

GENERAL DISCUSSION

Post to this category if you have a general question about microbiome science,
bioinformatics, or other general questions, ideas, or topics to discuss.
Examples of posts include study design, paper discussion, etc. Posts in this
category will not be triaged by a QIIME 2 Moderator.
15 / month

DEVELOPER DISCUSSION

Post to this category if you are a developer and have a questions, idea, or
suggestion. Posts in this category will be triaged by a QIIME 2 Moderator and
responded to promptly.
5 / month

COMMUNITY CONTRIBUTIONS

Post to this category if you have a contribution related to QIIME 2. Examples
include tutorials, plugins, doc translation, etc. Posts in this category will
not be triaged by a QIIME 2 Moderator. Please do not post any questions in this
category.
Plugins Tutorials Data resources Translations
1 / month

Q2-JOBS

You can find microbiome, bioinformatics, and QIIME 2 employment opportunities on
q2-jobs, the QIIME 2 Forum’s Job Board. Feel free to post your own job
announcements - it’s free. We just ask that posts are restricted to jobs
relevant to the QIIME 2 user and developer community.
64

OTHER BIOINFORMATICS TOOLS

Post to this category if you have a question about a bioinformatics tool that is
not related to QIIME 2. Examples include phyloseq, mothur, etc. Posts in this
category will not be triaged by a QIIME 2 Moderator.
6 / month

IDEAS AND SUGGESTIONS

Post to this category if you have idea, or suggestion for changing or improving
QIIME 2. Posts in this category will be triaged by a QIIME 2 Moderator and
responded to.
198

MISC

This category contains miscellaneous subcategories that do not fit in anywhere
else on the Forum. Posts in this category will not be triaged by a QIIME 2
Moderator. Please do not post any questions in this category.
12


Latest

Frequent Questions and "Best of the QIIME 2 Forum"
General Discussion
best-of-the-forum
2
Feb 2020
Rescript evaluate-fit-classifier - Plugin error from rescript: Passing a set as
an indexer is not supported. Use a list instead.
Technical Support
queued
8
2h
For a paired end data, i have 1 adaptor sequence in the sample sheet as per the
kit. However, cutadapt trimming step requires me to provide 2 adaptor sequences
(--p-adaptor-f and --p-adaptor-r). How to provide 2 adaptor sequences if there's
only 1 provid
General Discussion
cutadaptqiime2queued
0
5h
installing qiime2 into windows 11
Technical Support
9
14h
Core diversity analysis error
User Support
queued
9
14h
Installing on Apple M3 Max
Technical Support
queued
0
16h
Introducing Greengenes2 2022.10
Community Contributions
taxonomyphylogenygreengenes2greengenes
71
19h
Phylogeny error
Technical Support
phylogeny
4
21h

Plugin error from dada2, 16S paired-end fastq files can't generate feature table
through dada2
Technical Support
dada2feature-table
9
22h
converting .bam to .fastq
Other Bioinformatics Tools
queued
0
22h
Alpha rarefaction plot is blank
Technical Support
8
1d
[RESOLVED] bug in RESCRIPt get-gtdb-data action in initial 2024.5 release
Announcements
data-integrity-bug
0
1d
using rescript for new GTBD release
User Support
3
1d
How to choose my sampling depth according to aplpha rarefaction plot?
User Support
alphaalpha-rarefactionrarefaction
2
2d
error installing q2-fondue in version 2024.5
Technical Support
16
3d
When processing Pacbio full-length 16S data, the number of sequences generated
in the OTU table or ASV table is too small
General Discussion
queued
0
3d
importing fastq data: forward.fastq.gz not found
User Support
7
4d
error in picrust2 plugin outputs
Community Plugin Support
queued
2
5d
Creating a relative abundance bar plot in R with qiime2 data
Other Bioinformatics Tools
3
5d
Alpha group significance or boxplots for groups of two samples
User Support
group-significance
2
5d
More









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